The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data
Gilberto Pastorello, Carlo Trotta, E. Canfora, Housen Chu, Danielle Christianson, You-Wei Cheah, C. Poindexter, Jiquan Chen, Abdelrahman Elbashandy, Marty Humphrey, Peter Isaac, Diego Polidori, Markus Reichstein, Alessio Ribeca, Catharine van Ingen, Nicolas Vuichard, Leiming Zhang, B.D. Amiro, Christof Ammann, M. Altaf Arain, Jonas Ardö, Timothy J. Arkebauer, Stefan K. Arndt, Nicola Arriga, Marc Aubinet, Mika Aurela, Dennis Baldocchi, Alan Barr, Eric Beamesderfer, Luca Belelli Marchesini, Onil Bergeron, Jason Beringer, Christian Bernhofer, Daniel Berveiller, D. P. Billesbach, T. Andrew Black, Peter D. Blanken, Gil Bohrer, Julia Boike, Paul V. Bolstad, Damien Bonal, Jean-Marc Bonnefond, David R. Bowling, Rosvel Bracho, Jason Brodeur, Christian Brümmer, Nina Buchmann, Benoît Burban, Sean P. Burns, Pauline Buysse, Peter Cale, M. Cavagna, Pierre Cellier, Shiping Chen, Isaac Chini, Torben R. Christensen, James Cleverly, Alessio Collalti, Claudia Consalvo, Bruce D. Cook, David Cook, Carole Coursolle, Edoardo Cremonese, Peter S. Curtis, Ettore D’Andrea, Humberto da Rocha, Xiaoqin Dai, Kenneth J. Davis, Bruno De Cinti, A. de Grandcourt, Anne De Ligne, Raimundo Cosme de Oliveira, Nicolas Delpierre, Ankur R. Desai, Carlos Marcelo Di Bella, Paul Di Tommasi, A. J. Dolman, Francisco Domingo, Gang Dong, Sabina Dore, Pierpaolo Duce, Éric Dufrêne, Allison L. Dunn, J.T. Dusek, Derek Eamus, Uwe Eichelmann, Hatim Abdalla M. ElKhidir, Werner Eugster, Cäcilia Ewenz, B. E. Ewers, D. Famulari, Silvano Fares, Iris Feigenwinter, Andrew Feitz, Rasmus Fensholt, Gianluca Filippa, M. L. Fischer, J. M. Frank, Marta Galvagno, Mana Gharun, Damiano Gianelle, Bert Gielen, Beniamino Gioli, Anatoly A. Gitelson, Ignacio Goded, Mathias Goeckede, Allen H. Goldstein, Christopher M. Gough, Michael L. Goulden, Alexander Graf, Anne Griebel, Carsten Gruening, Thomas Grünwald, Albin Hammerle, Shijie Han, Xingguo Han, Birger Ulf Hansen, Chad Hanson, Juha Hatakka, Yongtao He, Markus Hehn, Bernard Heinesch, Nina Hinko‐Najera, Lukas Hörtnagl, Lindsay B. Hutley, Andreas Ibrom, Hiroki Ikawa, Marcin Jackowicz-Korczyński, Dalibor Janouš, W.W.P. Jans, Rachhpal S. Jassal, Shicheng Jiang, Tomomichi Kato, Myroslava Khomik, Janina Klatt, Alexander Knohl, Sara Knox, Hideki Kobayashi, Georgia R. Koerber, Olaf Kolle, Yukio Kosugi, Ayumi Kotani, Andrew S. Kowalski, B. Kruijt, Juliya Kurbatova, Werner L. Kutsch, Hyojung Kwon, Samuli Launiainen, Tuomas Laurila, B. E. Law, R. Leuning, Yingnian Li, Michael J. Liddell, Jean‐Marc Limousin, Marryanna Lion, Adam Liska, Annalea Lohila, Ana López‐Ballesteros, Efrén López‐Blanco, Benjamin Loubet, Denis Loustau, Antje Maria Moffat, Johannes Lüers, Siyan Ma, Craig Macfarlane, Vincenzo Magliulo, Regine Maier, Ivan Mammarella, Giovanni Manca, Barbara Marcolla, Hank A. Margolis, Serena Marras, W. J. Massman, Mikhail Mastepanov, Roser Matamala, Jaclyn Hatala Matthes, Francesco Mazzenga, Harry McCaughey, Ian McHugh, Andrew M. S. McMillan, Lutz Merbold, Wayne S. Meyer, Tilden P. Meyers, S. D. Miller, Stefano Minerbi, Uta Moderow, Russell K. Monson, Leonardo Montagnani, Caitlin E. Moore, E.J. Moors, Virginie Moreaux, Christine Moureaux, J. William Munger, T. Nakai, Johan Neirynck, Zoran Nesic, Giacomo Nicolini, Asko Noormets, Matthew Northwood, Marcelo D. Nosetto, Yann Nouvellon, Kimberly A. Novick, W. C. Oechel, Jørgen E. Olesen, Jean‐Marc Ourcival, S. A. Papuga, Frans‐Jan W. Parmentier, Eugénie Paul‐Limoges, Marián Pavelka, Matthias Peichl, Elise Pendall, Richard P. Phillips, Kim Pilegaard, Norbert Pirk, Gabriela Posse, Thomas L. Powell, Heiko Prasse, Suzanne M. Prober, Serge Rambal, Üllar Rannik, Naama Raz‐Yaseef, Corinna Rebmann, David E. Reed, Víctor Resco de Dios, Natalia Restrepo‐Coupe, Borja R. Reverter, Marilyn Roland, Simone Sabbatini, Torsten Sachs, S. R. Saleska, Enrique P. Sánchez-Cañete, Z. M. Sánchez-Mejía, Hans Peter Schmid, Marius Schmidt, Karl Schneider, Frederik Schrader, Ivan Schroder, Russell L. Scott, Pavel Sedlák, Penélope Serrano-Ortíz, Changliang Shao, Peili Shi, Ivan Shironya, Lukas Siebicke, Ladislav Šigut, Richard Silberstein, Costantino Sirca, Donatella Spano, R. Steinbrecher, Robert M. Stevens, Cove Sturtevant, Andy Suyker, Torbern Tagesson, Satoru Takanashi, Yanhong Tang, Nigel Tapper, Jonathan E. Thom, Michele Tomassucci, Juha‐Pekka Tuovinen, S. P. Urbanski, Р. Валентини, M. K. van der Molen, Eva van Gorsel, J. van Huissteden, Andrej Varlagin, Joe Verfaillie, Timo Vesala, Caroline Vincke, Domenico Vitale, N. N. Vygodskaya, Jeffrey P. Walker, Elizabeth A. Walter‐Shea, Huimin Wang, R. J. Weber, Sebastian Westermann, Christian Wille, Steven C. Wofsy, Georg Wohlfahrt, Sebastian Wolf, William Woodgate, Yuelin Li, Roberto Zampedri, Junhui Zhang, Guoyi Zhou, Donatella Zona, D. Agarwal, S. Biraud, M. S. Torn, Dario Papale
Abstract
Abstract The FLUXNET2015 dataset provides ecosystem-scale data on CO 2 , water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as gap-filled time series, ecosystem respiration and photosynthetic uptake estimates, estimation of uncertainties, and metadata about the measurements, presented for the first time in this paper. In addition, 206 of these sites are for the first time distributed under a Creative Commons (CC-BY 4.0) license. This paper details this enhanced dataset and the processing methods, now made available as open-source codes, making the dataset more accessible, transparent, and reproducible.- Cite:
- Gilberto Pastorello, Carlo Trotta, E. Canfora, Housen Chu, Danielle Christianson, You-Wei Cheah, C. Poindexter, Jiquan Chen, Abdelrahman Elbashandy, Marty Humphrey, Peter Isaac, Diego Polidori, Markus Reichstein, Alessio Ribeca, Catharine van Ingen, Nicolas Vuichard, Leiming Zhang, B.D. Amiro, Christof Ammann, et al.. 2020. The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data. Scientific Data, Volume 7, Issue 1, 7(1).
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@article{Pastorello-2020-The,
title = "The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data",
author = {Pastorello, Gilberto and
Trotta, Carlo and
Canfora, E. and
Chu, Housen and
Christianson, Danielle and
Cheah, You-Wei and
Poindexter, C. and
Chen, Jiquan and
Elbashandy, Abdelrahman and
Humphrey, Marty and
Isaac, Peter and
Polidori, Diego and
Reichstein, Markus and
Ribeca, Alessio and
Ingen, Catharine van and
Vuichard, Nicolas and
Zhang, Leiming and
Amiro, B.D. and
Ammann, Christof and
Arain, M. Altaf and
Ard{\"o}, Jonas and
Arkebauer, Timothy J. and
Arndt, Stefan K. and
Arriga, Nicola and
Aubinet, Marc and
Aurela, Mika and
Baldocchi, Dennis and
Barr, Alan and
Beamesderfer, Eric and
Marchesini, Luca Belelli and
Bergeron, Onil and
Beringer, Jason and
Bernhofer, Christian and
Berveiller, Daniel and
Billesbach, D. P. and
Black, T. Andrew and
Blanken, Peter D. and
Bohrer, Gil and
Boike, Julia and
Bolstad, Paul V. and
Bonal, Damien and
Bonnefond, Jean-Marc and
Bowling, David R. and
Bracho, Rosvel and
Brodeur, Jason and
Br{\"u}mmer, Christian and
Buchmann, Nina and
Burban, Beno{\^\i}t and
Burns, Sean P. and
Buysse, Pauline and
Cale, Peter and
Cavagna, M. and
Cellier, Pierre and
Chen, Shiping and
Chini, Isaac and
Christensen, Torben R. and
Cleverly, James and
Collalti, Alessio and
Consalvo, Claudia and
Cook, Bruce D. and
Cook, David and
Coursolle, Carole and
Cremonese, Edoardo and
Curtis, Peter S. and
D{'}Andrea, Ettore and
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Dai, Xiaoqin and
Davis, Kenneth J. and
Cinti, Bruno De and
Grandcourt, A. de and
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Dufr{\^e}ne, {\'E}ric and
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ElKhidir, Hatim Abdalla M. and
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Feigenwinter, Iris and
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Moureaux, Christine and
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journal = "Scientific Data, Volume 7, Issue 1",
volume = "7",
number = "1",
year = "2020",
publisher = "Springer Science and Business Media LLC",
url = "https://gwf-uwaterloo.github.io/gwf-publications/G20-54001",
doi = "10.1038/s41597-020-0534-3",
abstract = "Abstract The FLUXNET2015 dataset provides ecosystem-scale data on CO 2 , water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as gap-filled time series, ecosystem respiration and photosynthetic uptake estimates, estimation of uncertainties, and metadata about the measurements, presented for the first time in this paper. In addition, 206 of these sites are for the first time distributed under a Creative Commons (CC-BY 4.0) license. This paper details this enhanced dataset and the processing methods, now made available as open-source codes, making the dataset more accessible, transparent, and reproducible.",
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<name type="personal">
<namePart type="given">Peter</namePart>
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<name type="personal">
<namePart type="given">Gil</namePart>
<namePart type="family">Bohrer</namePart>
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<name type="personal">
<namePart type="given">Julia</namePart>
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<name type="personal">
<namePart type="given">Paul</namePart>
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<abstract>Abstract The FLUXNET2015 dataset provides ecosystem-scale data on CO 2 , water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as gap-filled time series, ecosystem respiration and photosynthetic uptake estimates, estimation of uncertainties, and metadata about the measurements, presented for the first time in this paper. In addition, 206 of these sites are for the first time distributed under a Creative Commons (CC-BY 4.0) license. This paper details this enhanced dataset and the processing methods, now made available as open-source codes, making the dataset more accessible, transparent, and reproducible.</abstract>
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%0 Journal Article %T The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data %A Pastorello, Gilberto %A Trotta, Carlo %A Canfora, E. %A Chu, Housen %A Christianson, Danielle %A Cheah, You-Wei %A Poindexter, C. %A Chen, Jiquan %A Elbashandy, Abdelrahman %A Humphrey, Marty %A Isaac, Peter %A Polidori, Diego %A Reichstein, Markus %A Ribeca, Alessio %A Ingen, Catharine van %A Vuichard, Nicolas %A Zhang, Leiming %A Amiro, B. D. %A Ammann, Christof %A Arain, M. Altaf %A Ardö, Jonas %A Arkebauer, Timothy J. %A Arndt, Stefan K. %A Arriga, Nicola %A Aubinet, Marc %A Aurela, Mika %A Baldocchi, Dennis %A Barr, Alan %A Beamesderfer, Eric %A Marchesini, Luca Belelli %A Bergeron, Onil %A Beringer, Jason %A Bernhofer, Christian %A Berveiller, Daniel %A Billesbach, D. P. %A Black, T. Andrew %A Blanken, Peter D. %A Bohrer, Gil %A Boike, Julia %A Bolstad, Paul V. %A Bonal, Damien %A Bonnefond, Jean-Marc %A Bowling, David R. %A Bracho, Rosvel %A Brodeur, Jason %A Brümmer, Christian %A Buchmann, Nina %A Burban, Benoît %A Burns, Sean P. %A Buysse, Pauline %A Cale, Peter %A Cavagna, M. %A Cellier, Pierre %A Chen, Shiping %A Chini, Isaac %A Christensen, Torben R. %A Cleverly, James %A Collalti, Alessio %A Consalvo, Claudia %A Cook, Bruce D. %A Cook, David %A Coursolle, Carole %A Cremonese, Edoardo %A Curtis, Peter S. %A D’Andrea, Ettore %A Rocha, Humberto da %A Dai, Xiaoqin %A Davis, Kenneth J. %A Cinti, Bruno De %A Grandcourt, A. de %A Ligne, Anne De %A Oliveira, Raimundo Cosme de %A Delpierre, Nicolas %A Desai, Ankur R. %A Bella, Carlos Marcelo Di %A Tommasi, Paul Di %A Dolman, A. J. %A Domingo, Francisco %A Dong, Gang %A Dore, Sabina %A Duce, Pierpaolo %A Dufrêne, Éric %A Dunn, Allison L. %A Dusek, J. T. %A Eamus, Derek %A Eichelmann, Uwe %A ElKhidir, Hatim Abdalla M. %A Eugster, Werner %A Ewenz, Cäcilia %A Ewers, B. E. %A Famulari, D. %A Fares, Silvano %A Feigenwinter, Iris %A Feitz, Andrew %A Fensholt, Rasmus %A Filippa, Gianluca %A Fischer, M. L. %A Frank, J. M. %A Galvagno, Marta %A Gharun, Mana %A Gianelle, Damiano %A Gielen, Bert %A Gioli, Beniamino %A Gitelson, Anatoly A. %A Goded, Ignacio %A Goeckede, Mathias %A Goldstein, Allen H. %A Gough, Christopher M. %A Goulden, Michael L. %A Graf, Alexander %A Griebel, Anne %A Gruening, Carsten %A Grünwald, Thomas %A Hammerle, Albin %A Han, Shijie %A Han, Xingguo %A Hansen, Birger Ulf %A Hanson, Chad %A Hatakka, Juha %A He, Yongtao %A Hehn, Markus %A Heinesch, Bernard %A Hinko‐Najera, Nina %A Hörtnagl, Lukas %A Hutley, Lindsay B. %A Ibrom, Andreas %A Ikawa, Hiroki %A Jackowicz-Korczyński, Marcin %A Janouš, Dalibor %A Jans, W. W. P. %A Jassal, Rachhpal S. %A Jiang, Shicheng %A Kato, Tomomichi %A Khomik, Myroslava %A Klatt, Janina %A Knohl, Alexander %A Knox, Sara %A Kobayashi, Hideki %A Koerber, Georgia R. %A Kolle, Olaf %A Kosugi, Yukio %A Kotani, Ayumi %A Kowalski, Andrew S. %A Kruijt, B. %A Kurbatova, Juliya %A Kutsch, Werner L. %A Kwon, Hyojung %A Launiainen, Samuli %A Laurila, Tuomas %A Law, B. E. %A Leuning, R. %A Li, Yingnian %A Liddell, Michael J. %A Limousin, Jean‐Marc %A Lion, Marryanna %A Liska, Adam %A Lohila, Annalea %A López‐Ballesteros, Ana %A López‐Blanco, Efrén %A Loubet, Benjamin %A Loustau, Denis %A Moffat, Antje Maria %A Lüers, Johannes %A Ma, Siyan %A Macfarlane, Craig %A Magliulo, Vincenzo %A Maier, Regine %A Mammarella, Ivan %A Manca, Giovanni %A Marcolla, Barbara %A Margolis, Hank A. %A Marras, Serena %A Massman, W. J. %A Mastepanov, Mikhail %A Matamala, Roser %A Matthes, Jaclyn Hatala %A Mazzenga, Francesco %A McCaughey, Harry %A McHugh, Ian %A McMillan, Andrew M. S. %A Merbold, Lutz %A Meyer, Wayne S. %A Meyers, Tilden P. %A Miller, S. D. %A Minerbi, Stefano %A Moderow, Uta %A Monson, Russell K. %A Montagnani, Leonardo %A Moore, Caitlin E. %A Moors, E. J. %A Moreaux, Virginie %A Moureaux, Christine %A Munger, J. William %A Nakai, T. %A Neirynck, Johan %A Nesic, Zoran %A Nicolini, Giacomo %A Noormets, Asko %A Northwood, Matthew %A Nosetto, Marcelo D. %A Nouvellon, Yann %A Novick, Kimberly A. %A Oechel, W. C. %A Olesen, Jørgen E. %A Ourcival, Jean‐Marc %A Papuga, S. A. %A Parmentier, Frans‐Jan W. %A Paul‐Limoges, Eugénie %A Pavelka, Marián %A Peichl, Matthias %A Pendall, Elise %A Phillips, Richard P. %A Pilegaard, Kim %A Pirk, Norbert %A Posse, Gabriela %A Powell, Thomas L. %A Prasse, Heiko %A Prober, Suzanne M. %A Rambal, Serge %A Rannik, Üllar %A Raz‐Yaseef, Naama %A Rebmann, Corinna %A Reed, David E. %A Dios, Víctor Resco de %A Restrepo‐Coupe, Natalia %A Reverter, Borja R. %A Roland, Marilyn %A Sabbatini, Simone %A Sachs, Torsten %A Saleska, S. R. %A Sánchez-Cañete, Enrique P. %A Sánchez-Mejía, Z. M. %A Schmid, Hans Peter %A Schmidt, Marius %A Schneider, Karl %A Schrader, Frederik %A Schroder, Ivan %A Scott, Russell L. %A Sedlák, Pavel %A Serrano-Ortíz, Penélope %A Shao, Changliang %A Shi, Peili %A Shironya, Ivan %A Siebicke, Lukas %A Šigut, Ladislav %A Silberstein, Richard %A Sirca, Costantino %A Spano, Donatella %A Steinbrecher, R. %A Stevens, Robert M. %A Sturtevant, Cove %A Suyker, Andy %A Tagesson, Torbern %A Takanashi, Satoru %A Tang, Yanhong %A Tapper, Nigel %A Thom, Jonathan E. %A Tomassucci, Michele %A Tuovinen, Juha‐Pekka %A Urbanski, S. P. %A Валентини, Р. %A Molen, M. K. van der %A Gorsel, Eva van %A Huissteden, J. van %A Varlagin, Andrej %A Verfaillie, Joe %A Vesala, Timo %A Vincke, Caroline %A Vitale, Domenico %A Vygodskaya, N. N. %A Walker, Jeffrey P. %A Walter‐Shea, Elizabeth A. %A Wang, Huimin %A Weber, R. J. %A Westermann, Sebastian %A Wille, Christian %A Wofsy, Steven C. %A Wohlfahrt, Georg %A Wolf, Sebastian %A Woodgate, William %A Li, Yuelin %A Zampedri, Roberto %A Zhang, Junhui %A Zhou, Guoyi %A Zona, Donatella %A Agarwal, D. %A Biraud, S. %A Torn, M. S. %A Papale, Dario %J Scientific Data, Volume 7, Issue 1 %D 2020 %V 7 %N 1 %I Springer Science and Business Media LLC %F Pastorello-2020-The %X Abstract The FLUXNET2015 dataset provides ecosystem-scale data on CO 2 , water, and energy exchange between the biosphere and the atmosphere, and other meteorological and biological measurements, from 212 sites around the globe (over 1500 site-years, up to and including year 2014). These sites, independently managed and operated, voluntarily contributed their data to create global datasets. Data were quality controlled and processed using uniform methods, to improve consistency and intercomparability across sites. The dataset is already being used in a number of applications, including ecophysiology studies, remote sensing studies, and development of ecosystem and Earth system models. FLUXNET2015 includes derived-data products, such as gap-filled time series, ecosystem respiration and photosynthetic uptake estimates, estimation of uncertainties, and metadata about the measurements, presented for the first time in this paper. In addition, 206 of these sites are for the first time distributed under a Creative Commons (CC-BY 4.0) license. This paper details this enhanced dataset and the processing methods, now made available as open-source codes, making the dataset more accessible, transparent, and reproducible. %R 10.1038/s41597-020-0534-3 %U https://gwf-uwaterloo.github.io/gwf-publications/G20-54001 %U https://doi.org/10.1038/s41597-020-0534-3
Markdown (Informal)
[The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data](https://gwf-uwaterloo.github.io/gwf-publications/G20-54001) (Pastorello et al., GWF 2020)
- The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data (Pastorello et al., GWF 2020)
ACL
- Gilberto Pastorello, Carlo Trotta, E. Canfora, Housen Chu, Danielle Christianson, You-Wei Cheah, C. Poindexter, Jiquan Chen, Abdelrahman Elbashandy, Marty Humphrey, Peter Isaac, Diego Polidori, Markus Reichstein, Alessio Ribeca, Catharine van Ingen, Nicolas Vuichard, Leiming Zhang, B.D. Amiro, Christof Ammann, et al.. 2020. The FLUXNET2015 dataset and the ONEFlux processing pipeline for eddy covariance data. Scientific Data, Volume 7, Issue 1, 7(1).